BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F08LP1|AL426397
(799 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1119 1564 0.0
>3x_Contig1119
Length = 5045
Score = 1564 bits (787), Expect = 0.0
Identities = 794/799 (99%)
Strand = Plus / Plus
Query: 1 gatctttgaattatcttaacagggtaaagttcacggttccctagctcgtgctggtaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3136 gatctttgaattatcttaacagggtaaagttcacggttccctagctcgtgctggtaaggt 3195
Query: 61 taagtctcaaactccaaaggttgaaaagcaagaaaagccaaagcaaccaaagggtagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3196 taagtctcaaactccaaaggttgaaaagcaagaaaagccaaagcaaccaaagggtagagc 3255
Query: 121 ttacaagagattattgtwcaccagaagattcgtcaacgttactttgaccaacggtaagag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3256 ttacaagagattattgtacaccagaagattcgtcaacgttactttgaccaacggtaagag 3315
Query: 181 aaagatgaacccatctccatcttctcaataagcaaagaattaattttcaaatcattcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3316 aaagatgaacccatctccatcttctcaataagcaaagaattaattttcaaatcattcctt 3375
Query: 241 taaattttaaatcaggttgtttgaatgtcaacatcataggcaccgctcaatctattcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3376 taaattttaaatcaggttgtttgaatgtcaacatcataggcaccgctcaatctattcatc 3435
Query: 301 gctttttatttgtatgatcgatatcttttctctgctttttgatatattattatcatcgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3436 gctttttatttgtatgatcgatatcttttctctgctttttgatatattattatcatcgct 3495
Query: 361 tattaggatttatatagttacattaagtaccaatgtccttaaaataactgtttaactaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3496 tattaggatttatatagttacattaagtaccaatgtccttaaaataactgtttaactaca 3555
Query: 421 tgacaaataggtttcattccgacactatactctcatagtatgtggcaaaagcggattata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3556 tgacaaataggtttcattccgacactatactctcatagtatgtggcaaaagcggattata 3615
Query: 481 gtwattgctatacatcaataatgtttatgttggccgttccatttganattacatactgaa 540
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3616 gtaattgctatacatcaataatgtttatgttggccgttccatttgaaattacatactgaa 3675
Query: 541 tttgaatatttgatagataaatctggcgtaaaaacaaagctcatcgaaagttgtagatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3676 tttgaatatttgatagataaatctggcgtaaaaacaaagctcatcgaaagttgtagatat 3735
Query: 601 tgcattcaatgtccaaactaaccaagcggncgtcatttcatcaatattaaaaagctcaac 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3736 tgcattcaatgtccaaactaaccaagcggacgtcatttcatcaatattaaaaagctcaac 3795
Query: 661 gcaatgtcatcaacactatctgacgatataaaacgtttgaraacagaattcccatatact 720
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3796 gcaatgtcatcaacactatctgacgatataaaacgtttgaaaacagaattcccatatact 3855
Query: 721 tctgtggaatcgttgcatggaatacctaagaagaccaaattacctgcttcgtctttactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3856 tctgtggaatcgttgcatggaatacctaagaagaccaaattacctgcttcgtctttactg 3915
Query: 781 gaagaactgggcaaacttt 799
|||||||||||||||||||
Sbjct: 3916 gaagaactgggcaaacttt 3934
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6666
Number of Sequences: 1807
Number of extensions: 6666
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 799
length of database: 10,358,551
effective HSP length: 16
effective length of query: 783
effective length of database: 10,329,639
effective search space: 8088107337
effective search space used: 8088107337
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)